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Analysis of transcript abundance between two cDNA libraries

Select a pair of Magnaporthe grisea cDNA libraries to identify those unigenes that show significantly different levels of EST transcript abundance between the two libraries. Click here for more information on how this data was created.

Select a pair of libraries to compare

Select the threshold level for significance




Details of each library (click on library name for further details, total number of ESTs sequenced from each library in brackets)
Mag02: 70-15 appressorium (2553).
Mag03: 70-15 mycelium grown in minimal medium (1466).
Mag04: CP987 mycelium grown in medium containing rice cell walls (3924).
Mag06: Guy11 mycelium grown in complete medium (3193).
Mag07: Guy11 conidia (3405).
Mag08: Guy11 mycelium grown in nitrogen starvation medium (4310).
Mag10: pmk1 germinated conidia (4421).
Mag15: Mixed mated culture (6521).

Reference: Soanes, D.M., Talbot, N.J. (2005) A bioinformatics tool for analysis of EST abundance during infection-related development by Magnaporthe grisea. Molecular Plant Pathology 6: 503-512. [pdf]